PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_33835
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 148aa    MW: 16913.4 Da    PI: 10.8043
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_33835genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22e-18252255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +g+++AeIr p+ +g   r++lg+f+ta +Aa+a+++a+ +++g
  PEQU_33835  2 HYRGVRKRP-WGKFAAEIRNPKRRG--SRIWLGTFDTAVQAARAYDRAAFRMRG 52
                7********.**********96554..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.6E-32161IPR001471AP2/ERF domain
CDDcd000187.19E-29261No hitNo description
SuperFamilySSF541711.11E-22262IPR016177DNA-binding domain
PROSITE profilePS5103224.131260IPR001471AP2/ERF domain
PfamPF008471.6E-13252IPR001471AP2/ERF domain
SMARTSM003803.6E-37266IPR001471AP2/ERF domain
PRINTSPR003675.7E-14314IPR001471AP2/ERF domain
PRINTSPR003675.7E-144262IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
RHYRGVRKRP WGKFAAEIRN PKRRGSRIWL GTFDTAVQAA RAYDRAAFRM RGSKAILNFP  60
NEIGQSMDKS NRNTSAKPPE KRGSECGKAA KVMKKDGLEQ SEWKIPAECD RIPAIWPVLW  120
DEAEVFDLLP LSPFDSHRTM GFPQLIVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A7e-29163466ATERF1
3gcc_A7e-29163466ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010919711.12e-44PREDICTED: ethylene-responsive transcription factor ERF105-like
TrEMBLJ7LJY78e-44J7LJY7_POPCA; ERF5-2
STRINGVIT_16s0013g01120.t012e-42(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.16e-30ERF family protein